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-rw-r--r--analysis/year.R20
-rw-r--r--src/Makefile.am39
-rw-r--r--src/aggregator.c6
-rw-r--r--src/assign/assign_protein_type.c (renamed from src/assign_protein_type.c)87
-rw-r--r--src/assign/assign_protein_type.h (renamed from src/assign_protein_type.h)0
-rw-r--r--src/error/check_error.c (renamed from src/check_error.c)0
-rw-r--r--src/error/check_error.h (renamed from src/check_error.h)0
-rw-r--r--src/error/check_h5_error.c (renamed from src/check_h5_error.c)0
-rw-r--r--src/error/check_h5_error.h (renamed from src/check_h5_error.h)0
-rw-r--r--src/error/check_ncbi_error.c (renamed from src/check_ncbi_error.c)0
-rw-r--r--src/error/check_ncbi_error.h (renamed from src/check_ncbi_error.h)0
-rw-r--r--src/load/load_influenza_aa_dat.c (renamed from src/load_influenza_aa_dat.c)4
-rw-r--r--src/load/load_influenza_aa_dat.h (renamed from src/load_influenza_aa_dat.h)0
-rw-r--r--src/load/load_influenza_faa.c (renamed from src/load_influenza_faa.c)10
-rw-r--r--src/load/load_influenza_faa.h (renamed from src/load_influenza_faa.h)0
-rw-r--r--src/model/gi_type_data.h21
-rw-r--r--src/model/gi_type_data_init.c36
-rw-r--r--src/model/gi_type_data_init.h14
-rw-r--r--src/model/sequence_data.h (renamed from src/sequence_data.h)5
-rw-r--r--src/model/sequence_data_init.c (renamed from src/sequence_data_init.c)6
-rw-r--r--src/model/sequence_data_init.h (renamed from src/sequence_data_init.h)0
-rw-r--r--src/updator.c4
22 files changed, 181 insertions, 71 deletions
diff --git a/src/model/sequence_data.h b/src/model/sequence_data.h
new file mode 100644
index 0000000..9db91ac
--- a/dev/null
+++ b/src/model/sequence_data.h
@@ -0,0 +1,15 @@
+#ifndef SEQUENCE_DATA_H
+#define SEQUENCE_DATA_H
+
+#define SEQUENCE_DATA_FIELD_NUM 3
+
+#define SEQUENCE_DATA_FIELD_NAMES { "GI", "GB", "Description" }
+
+typedef struct
+{
+ int gi;
+ char gb[9];
+ char description[196];
+} sequence_data;
+
+#endif // SEQUENCE_DATA_H

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