22 files changed, 181 insertions, 71 deletions

diff --git a/src/model/gi_type_data_init.c b/src/model/gi_type_data_init.c
new file mode 100644
index 0000000..4a161c7
--- a/dev/null
+++ b/src/model/gi_type_data_init.c
@@ -0,0 +1,36 @@
+#include "gi_type_data_init.h"
+#include "gi_type_data.h"
+
+/*
+ * There should be some way to automate the generation of these values
+ * or at least this source file based on just the definition of the
+ * struct.  Perhaps an HDF5 precompiler could do such a thing.
+ */
+void
+gi_type_data_init (size_t *dst_size, size_t *dst_offset, size_t *dst_sizes,
+		   hid_t *field_type)
+{
+  *dst_size = sizeof (gi_type_data);
+
+  dst_offset[0] = HOFFSET (gi_type_data, gi);
+  dst_offset[1] = HOFFSET (gi_type_data, type);
+  dst_offset[2] = HOFFSET (gi_type_data, protein);
+
+  gi_type_data dst_buf[1];
+
+  dst_sizes[0] = sizeof (dst_buf[0].gi);
+  dst_sizes[1] = sizeof (dst_buf[0].type);
+  dst_sizes[2] = sizeof (dst_buf[0].protein);
+
+  field_type[0] = H5T_NATIVE_INT;
+
+  hid_t type_h5t = H5Tcopy (H5T_C_S1);
+  H5Tset_size (type_h5t, 2);
+  field_type[1] = type_h5t;
+
+  hid_t protein_h5t = H5Tcopy (H5T_C_S1);
+  H5Tset_size (protein_h5t, 7);
+  field_type[2] = protein_h5t;
+
+  return;
+}