| -rw-r--r-- | analysis/year.R | 20 | ||||
| -rw-r--r-- | src/Makefile.am | 39 | ||||
| -rw-r--r-- | src/aggregator.c | 6 | ||||
| -rw-r--r-- | src/assign/assign_protein_type.c (renamed from src/assign_protein_type.c) | 87 | ||||
| -rw-r--r-- | src/assign/assign_protein_type.h (renamed from src/assign_protein_type.h) | 0 | ||||
| -rw-r--r-- | src/error/check_error.c (renamed from src/check_error.c) | 0 | ||||
| -rw-r--r-- | src/error/check_error.h (renamed from src/check_error.h) | 0 | ||||
| -rw-r--r-- | src/error/check_h5_error.c (renamed from src/check_h5_error.c) | 0 | ||||
| -rw-r--r-- | src/error/check_h5_error.h (renamed from src/check_h5_error.h) | 0 | ||||
| -rw-r--r-- | src/error/check_ncbi_error.c (renamed from src/check_ncbi_error.c) | 0 | ||||
| -rw-r--r-- | src/error/check_ncbi_error.h (renamed from src/check_ncbi_error.h) | 0 | ||||
| -rw-r--r-- | src/load/load_influenza_aa_dat.c (renamed from src/load_influenza_aa_dat.c) | 4 | ||||
| -rw-r--r-- | src/load/load_influenza_aa_dat.h (renamed from src/load_influenza_aa_dat.h) | 0 | ||||
| -rw-r--r-- | src/load/load_influenza_faa.c (renamed from src/load_influenza_faa.c) | 10 | ||||
| -rw-r--r-- | src/load/load_influenza_faa.h (renamed from src/load_influenza_faa.h) | 0 | ||||
| -rw-r--r-- | src/model/gi_type_data.h | 21 | ||||
| -rw-r--r-- | src/model/gi_type_data_init.c | 36 | ||||
| -rw-r--r-- | src/model/gi_type_data_init.h | 14 | ||||
| -rw-r--r-- | src/model/sequence_data.h (renamed from src/sequence_data.h) | 5 | ||||
| -rw-r--r-- | src/model/sequence_data_init.c (renamed from src/sequence_data_init.c) | 6 | ||||
| -rw-r--r-- | src/model/sequence_data_init.h (renamed from src/sequence_data_init.h) | 0 | ||||
| -rw-r--r-- | src/updator.c | 4 |
22 files changed, 181 insertions, 71 deletions
diff --git a/src/load/load_influenza_faa.h b/src/load/load_influenza_faa.h new file mode 100644 index 0000000..569c411 --- a/dev/null +++ b/src/load/load_influenza_faa.h @@ -0,0 +1,11 @@ +#ifndef LOAD_INFLUENZA_FAA_H +#define LOAD_INFLUENZA_FAA_H + +#include <hdf5.h> + +/* + * Load the protein sequence data from the NCBI influenza.faa file. + */ +void load_influenza_faa (hid_t file_id); + +#endif // LOAD_INFLUENZA_FAA_H |
