7 files changed, 35 insertions, 31 deletions

diff --git a/src/assign/assign_protein_type.c b/src/assign/assign_protein_type.c
index 1df4c8d..065880f 100644
--- a/src/assign/assign_protein_type.c
+++ b/src/assign/assign_protein_type.c
@@ -19,12 +19,12 @@
 /*
  * BLAST database containing all of the influenza protein sequences.
  */
-#define SEQDB "/home/don/exp004/influenzadb/influenzadb"
+#define SEQDB "/u/ac/dpellegr/Documents/exp004/influenzadb/influenzadb"
 
 /*
  * BLAST reference database of prototypical protein types.
  */
-#define REFDB "/home/don/exp004/influenzadb/proteinnames"
+#define REFDB "/u/ac/dpellegr/Documents/exp004/influenzadb/proteinnames"
 
 #define BUFFER_LEN 50
 
@@ -68,7 +68,7 @@ assign_protein_type (hid_t file_id)
   herr_t status = H5TBget_table_info (file_id, "influenza.faa", &faa_nfields,
 				      &faa_nrecords);
   if (status < 0)
-    check_h5_error (status, __FILE__, __LINE__);
+    check_h5_error (__FILE__, __LINE__);
 
   sequence_data *faa_buf = malloc (sizeof (sequence_data) * faa_nrecords);
 
@@ -81,7 +81,7 @@ assign_protein_type (hid_t file_id)
   status = H5TBread_table (file_id, "influenza.faa", faa_size, faa_offset,
 			   faa_sizes, faa_buf);
   if (status < 0)
-    check_h5_error (status, __FILE__, __LINE__);
+    check_h5_error (__FILE__, __LINE__);
 
   /*
    * Allocate memory for the new table.
@@ -115,7 +115,7 @@ assign_protein_type (hid_t file_id)
       status = H5TBget_table_info (file_id, "gi_type_data", &gi_nfields,
 				   &gi_nrecords);
       if (status < 0)
-	check_h5_error (status, __FILE__, __LINE__);
+	check_h5_error (__FILE__, __LINE__);
 
       printf ("  Using gi_type_data cache of %i records.\n",
 	      (int) gi_nrecords);
@@ -125,11 +125,11 @@ assign_protein_type (hid_t file_id)
       status = H5TBread_table (file_id, "gi_type_data", gi_size, gi_offset,
 			       gi_sizes, old_buf);
       if (status < 0)
-	check_h5_error (status, __FILE__, __LINE__);
+	check_h5_error (__FILE__, __LINE__);
 
       status = H5TBdelete_record (file_id, "gi_type_data", 0, gi_nrecords);
       if (status < 0)
-	check_h5_error (status, __FILE__, __LINE__);
+	check_h5_error (__FILE__, __LINE__);
 
     }
 
@@ -155,7 +155,7 @@ assign_protein_type (hid_t file_id)
 			       gi_offset, gi_field_type,
 			       chunk_size, fill_data, compress, NULL);
       if (status < 0)
-	check_h5_error (status, __FILE__, __LINE__);
+	check_h5_error (__FILE__, __LINE__);
 
     }
 
@@ -295,11 +295,11 @@ assign_protein_type (hid_t file_id)
 				       gi_size, gi_offset, gi_sizes,
 				       &new_buf[i - 1000]);
 	  if (status < 0)
-	    check_h5_error (status, __FILE__, __LINE__);
+	    check_h5_error (__FILE__, __LINE__);
 
 	  status = H5Fflush (file_id, H5F_SCOPE_GLOBAL);
 	  if (status < 0)
-	    check_h5_error (status, __FILE__, __LINE__);
+	    check_h5_error (__FILE__, __LINE__);
 
 	  written = i;
 
@@ -326,11 +326,11 @@ assign_protein_type (hid_t file_id)
     }
 
   if (status < 0)
-    check_h5_error (status, __FILE__, __LINE__);
+    check_h5_error (__FILE__, __LINE__);
 
   status = H5Fflush (file_id, H5F_SCOPE_GLOBAL);
   if (status < 0)
-    check_h5_error (status, __FILE__, __LINE__);
+    check_h5_error (__FILE__, __LINE__);
 
   free (faa_buf);
   free (old_buf);