#ifndef ASSIGN_PROTEIN_TYPE_H
#define ASSIGN_PROTEIN_TYPE_H

#include <hdf5.h>

/*
 * Determine the protein type for each protein sequence record.  The
 * technique used by NCBI is used here.  A BLAST database of
 * prototypical protein sequences serves as the reference.  Each input
 * sequence is BLASTed against this database.  The first hit is used
 * to assign a protein type to sequence.
 */
void
assign_protein_type (hid_t file_id);

#endif // ASSIGN_PROTEIN_TYPE_H