| -rw-r--r-- | src/Makefile.am | 6 | ||||
| -rw-r--r-- | src/aggregator.c | 7 | ||||
| -rw-r--r-- | src/load_influenza_faa.c | 9 | ||||
| -rw-r--r-- | src/load_influenza_faa.h | 12 |
4 files changed, 31 insertions, 3 deletions
diff --git a/src/Makefile.am b/src/Makefile.am index 7cb4282..f4469db 100644 --- a/src/Makefile.am +++ b/src/Makefile.am @@ -2,11 +2,13 @@ bin_PROGRAMS = aggregator aggregator_SOURCES = \ aggregator.c \ - load_influenza_aa_dat.c + load_influenza_aa_dat.c \ + load_influenza_faa.c aggregator_LDADD = -lhdf5 noinst_HEADERS = \ - load_influenza_aa_dat.h + load_influenza_aa_dat.h \ + load_influenza_faa.h AM_CFLAGS = -Wall -std=gnu99 -ggdb diff --git a/src/aggregator.c b/src/aggregator.c index da6db08..228e5c6 100644 --- a/src/aggregator.c +++ b/src/aggregator.c @@ -3,8 +3,8 @@ * container. */ -#include <hdf5.h> #include "load_influenza_aa_dat.h" +#include "load_influenza_faa.h" #define FILE "influenza.h5" @@ -22,6 +22,11 @@ main() load_influenza_aa_dat (file_id); /* + * Load the FASTA protein sequence data file. + */ + load_influenza_faa (file_id); + + /* * Close the HD5 file. */ H5Fclose (file_id); diff --git a/src/load_influenza_faa.c b/src/load_influenza_faa.c new file mode 100644 index 0000000..8c43992 --- a/dev/null +++ b/src/load_influenza_faa.c @@ -0,0 +1,9 @@ +#include "load_influenza_faa.h" + +void +load_influenza_faa (hid_t file_id) +{ + + + return; +} diff --git a/src/load_influenza_faa.h b/src/load_influenza_faa.h new file mode 100644 index 0000000..4b1dbdd --- a/dev/null +++ b/src/load_influenza_faa.h @@ -0,0 +1,12 @@ +#ifndef LOAD_INFLUENZA_FAA_H +#define LOAD_INFLUENZA_FAA_H + +#include <hdf5.h> + +/* + * Load the protein sequence data from the NCBI influenza.faa file. + */ +void +load_influenza_faa (hid_t file_id); + +#endif // LOAD_INFLUENZA_FAA_H |
