| author | Don Pellegrino <don@drexel.edu> | 2010-01-23 23:01:44 (GMT) |
|---|---|---|
| committer | Don Pellegrino <don@drexel.edu> | 2010-01-23 23:01:44 (GMT) |
| commit | 276817db439a3440a69425052e852cbefeb94417 (patch) (side-by-side diff) | |
| tree | 035df11a3e1e774ebcba126721d2869d1a42b75c | |
| parent | ff28b9c88cbcb4d5f715efedbc2b2bd486d3d789 (diff) | |
| download | exp007-276817db439a3440a69425052e852cbefeb94417.zip exp007-276817db439a3440a69425052e852cbefeb94417.tar.gz exp007-276817db439a3440a69425052e852cbefeb94417.tar.bz2 | |
Modified to test loading BLAST scores.
| -rw-r--r-- | src/aggregator.c | 13 |
1 files changed, 13 insertions, 0 deletions
diff --git a/src/aggregator.c b/src/aggregator.c index 200de7d..3bb3572 100644 --- a/src/aggregator.c +++ b/src/aggregator.c @@ -4,10 +4,12 @@ */ #include "error/check_h5_error.h" +#include "load/load_blast_scores.h" #include "load/load_influenza_aa_dat.h" #include "load/load_influenza_faa.h" #include <stdio.h> +#define BLASTFILE "run20090807.del" #define H5FILE "influenza.h5" #define INFLUENZA_AA_DAT "/u/ac/dpellegr/Documents/exp004/genomes/INFLUENZA/influenza_aa.dat" #define INFLUENZA_FAA "/u/ac/dpellegr/Documents/exp004/genomes/INFLUENZA/influenza.faa" @@ -38,15 +40,26 @@ main () /* * Load the supplementary protein data file. */ + /* printf ("Loading \"influenza_aa.dat\" with contents of %s.\n", INFLUENZA_AA_DAT); load_influenza_aa_dat (file_id, INFLUENZA_AA_DAT); + */ /* * Load the FASTA protein sequence data file. */ + /* printf ("Loading \"influenza.faa\" with contents of %s.\n", INFLUENZA_FAA); load_influenza_faa (file_id, INFLUENZA_FAA); + */ + + /* + * Load the BLAST scores. + */ + printf ("Loading \"blast\" with contents of %s.\n", + BLASTFILE); + load_blast_scores (file_id, BLASTFILE); /* * Close the HDF5 file. |
