summaryrefslogtreecommitdiffstats
authorDon Pellegrino <don@drexel.edu>2010-01-16 15:00:43 (GMT)
committer Don Pellegrino <don@drexel.edu>2010-01-16 15:00:43 (GMT)
commitad58bc2790477c9804641489ecf26437e784feff (patch) (side-by-side diff)
treefb61afcd2670734f0eda94118aff2f25685f37b9
parent4498865663dc42c25faf72e6ff72675538cdd697 (diff)
downloadexp007-ad58bc2790477c9804641489ecf26437e784feff.zip
exp007-ad58bc2790477c9804641489ecf26437e784feff.tar.gz
exp007-ad58bc2790477c9804641489ecf26437e784feff.tar.bz2
Added function declaration for load_influenza_faa.
-rw-r--r--src/Makefile.am6
-rw-r--r--src/aggregator.c7
-rw-r--r--src/load_influenza_faa.c9
-rw-r--r--src/load_influenza_faa.h12
4 files changed, 31 insertions, 3 deletions
diff --git a/src/Makefile.am b/src/Makefile.am
index 7cb4282..f4469db 100644
--- a/src/Makefile.am
+++ b/src/Makefile.am
@@ -2,11 +2,13 @@ bin_PROGRAMS = aggregator
aggregator_SOURCES = \
aggregator.c \
- load_influenza_aa_dat.c
+ load_influenza_aa_dat.c \
+ load_influenza_faa.c
aggregator_LDADD = -lhdf5
noinst_HEADERS = \
- load_influenza_aa_dat.h
+ load_influenza_aa_dat.h \
+ load_influenza_faa.h
AM_CFLAGS = -Wall -std=gnu99 -ggdb
diff --git a/src/aggregator.c b/src/aggregator.c
index da6db08..228e5c6 100644
--- a/src/aggregator.c
+++ b/src/aggregator.c
@@ -3,8 +3,8 @@
* container.
*/
-#include <hdf5.h>
#include "load_influenza_aa_dat.h"
+#include "load_influenza_faa.h"
#define FILE "influenza.h5"
@@ -22,6 +22,11 @@ main()
load_influenza_aa_dat (file_id);
/*
+ * Load the FASTA protein sequence data file.
+ */
+ load_influenza_faa (file_id);
+
+ /*
* Close the HD5 file.
*/
H5Fclose (file_id);
diff --git a/src/load_influenza_faa.c b/src/load_influenza_faa.c
new file mode 100644
index 0000000..8c43992
--- a/dev/null
+++ b/src/load_influenza_faa.c
@@ -0,0 +1,9 @@
+#include "load_influenza_faa.h"
+
+void
+load_influenza_faa (hid_t file_id)
+{
+
+
+ return;
+}
diff --git a/src/load_influenza_faa.h b/src/load_influenza_faa.h
new file mode 100644
index 0000000..4b1dbdd
--- a/dev/null
+++ b/src/load_influenza_faa.h
@@ -0,0 +1,12 @@
+#ifndef LOAD_INFLUENZA_FAA_H
+#define LOAD_INFLUENZA_FAA_H
+
+#include <hdf5.h>
+
+/*
+ * Load the protein sequence data from the NCBI influenza.faa file.
+ */
+void
+load_influenza_faa (hid_t file_id);
+
+#endif // LOAD_INFLUENZA_FAA_H

Valid XHTML 1.0 Strict

Copyright © 2009 Don Pellegrino All Rights Reserved.