exp007 - Influenza Data Processing

Age	Commit message (Collapse)	Author	Files	Lines
2010-03-05	Modified to take the location of the exp004 directory from an	Don Pellegrino	4	-14/+60
	environment variable.
2010-01-25	Added MatAssembly commands to write the cached data to the matrix structure.	Don Pellegrino	1	-0/+3

2010-01-25	Test of writing a sparse matrix to disk.	Don Pellegrino	1	-0/+10

2010-01-25	Added the initialization of a sparse matrix to be used to track the	Don Pellegrino	6	-24/+127
	pairwise BLAST scores for all influenza sequences. Modified the Autoconf input so that libraries are automatically added to LIBS rather than manually in Makefile.am. Added the use of the PETSc API which is used for the sparse matrix implementation.
2010-01-21	Removed unused status variable from check_h5_error function.	Donald Pellegrino	7	-31/+35

2010-01-19	Ran GNU indent on the code and headers.	Don Pellegrino	10	-93/+99

2010-01-19	Cleaned up some of the documentation.	Don Pellegrino	1	-4/+3

2010-01-19	Program now fully uses an existing file. The load functions detect	Don Pellegrino	7	-86/+201
	their existing target tables and purge them if they exist or create them if they don't. The assign function will reuse existing type values by gi and write a new table that is aligned by gi with influenza.faa.
2010-01-19	Updated to compile. Code fills a new table of type values however it does no...	Don Pellegrino	1	-106/+163

2010-01-18	Organzied the functions into assign, error, load and model subdirectories. C...	Don Pellegrino	22	-71/+181