summaryrefslogtreecommitdiffstats
AgeCommit message (Collapse)AuthorFilesLines
2010-01-19Program now fully uses an existing file. The load functions detectDon Pellegrino7-86/+201
their existing target tables and purge them if they exist or create them if they don't. The assign function will reuse existing type values by gi and write a new table that is aligned by gi with influenza.faa.
2010-01-18Organzied the functions into assign, error, load and model subdirectories. C...Don Pellegrino22-71/+181
2010-01-18Moved updating the HDF5 file to a separate driver.Don Pellegrino3-8/+43
2010-01-18Added loading of the influenza.faa file.Don Pellegrino4-8/+126
2010-01-18Ran GNU indent to format the code as per GNU coding conventions.Don Pellegrino13-148/+145
2010-01-17Added error checking routines. Added implementation ofDon Pellegrino12-13/+211
assign_protein_type tested against a single hard-coded sequence input. The next step is to iterate over all records in the HDF5 collection that don't have a type assigned and to assign a type value.
2010-01-16Added function declaration for load_influenza_faa.Don Pellegrino4-3/+31
2010-01-16Implemented the loading of the influenza_aa.dat file. Tested byDon Pellegrino4-41/+145
comparing an export of the data from the HDF5 file and the original file.
2010-01-15Code compiles and creates an HDF5 file containing a table with oneDon Pellegrino5-0/+208
record of influenza_aa.dat populated.

Valid XHTML 1.0 Strict

Copyright © 2009 Don Pellegrino All Rights Reserved.