| -rw-r--r-- | .gitignore | 5 | ||||
| -rw-r--r-- | src/Makefile.am | 10 | ||||
| -rw-r--r-- | src/assign_protein_type.c | 135 | ||||
| -rw-r--r-- | src/load_influenza_faa.c | 67 | ||||
| -rw-r--r-- | src/sequence_data.h | 16 | ||||
| -rw-r--r-- | src/sequence_data_init.c | 37 | ||||
| -rw-r--r-- | src/sequence_data_init.h | 14 |
7 files changed, 188 insertions, 96 deletions
diff --git a/src/sequence_data.h b/src/sequence_data.h new file mode 100644 index 0000000..fb4ff78 --- a/dev/null +++ b/src/sequence_data.h @@ -0,0 +1,16 @@ +#ifndef SEQUENCE_DATA_H +#define SEQUENCE_DATA_H + +#define SEQUENCE_DATA_FIELD_NUM 4 + +#define SEQUENCE_DATA_FIELD_NAMES { "GI", "GB", "Description", "Protein Type" } + +typedef struct +{ + int gi; + char gb[9]; + char description[196]; + char protein_type[7]; +} sequence_data; + +#endif // SEQUENCE_DATA_H |
