summaryrefslogtreecommitdiffstats
Unidiff
-rw-r--r--src/aggregator.c3
-rw-r--r--src/assign/assign_protein_type.c110
-rw-r--r--src/load/load_influenza_aa_dat.c13
-rw-r--r--src/load/load_influenza_aa_dat.h2
-rw-r--r--src/load/load_influenza_faa.c30
-rw-r--r--src/load/load_influenza_faa.h2
-rw-r--r--src/model/gi_type_data_init.c4
-rw-r--r--src/model/gi_type_data_init.h4
-rw-r--r--src/model/sequence_data_init.c18
-rw-r--r--src/model/sequence_data_init.h6
10 files changed, 99 insertions, 93 deletions
diff --git a/src/load/load_influenza_aa_dat.c b/src/load/load_influenza_aa_dat.c
index 3826349..b50fcab 100644
--- a/src/load/load_influenza_aa_dat.c
+++ b/src/load/load_influenza_aa_dat.c
@@ -15,7 +15,7 @@
15#define NFIELDS (hsize_t) 1115#define NFIELDS (hsize_t) 11
1616
17void17void
18load_influenza_aa_dat (hid_t file_id, const char* file_name)18load_influenza_aa_dat (hid_t file_id, const char *file_name)
19{19{
20 /*20 /*
21 * Model the data using native types.21 * Model the data using native types.
@@ -225,7 +225,8 @@ load_influenza_aa_dat (hid_t file_id, const char* file_name)
225 if (status < 0)225 if (status < 0)
226 check_h5_error (status, __FILE__, __LINE__);226 check_h5_error (status, __FILE__, __LINE__);
227227
228 status = H5TBdelete_record (file_id, "influenza_aa.dat", 0, nrecords);228 status =
229 H5TBdelete_record (file_id, "influenza_aa.dat", 0, nrecords);
229 if (status < 0)230 if (status < 0)
230 check_h5_error (status, __FILE__, __LINE__);231 check_h5_error (status, __FILE__, __LINE__);
231232
@@ -233,7 +234,7 @@ load_influenza_aa_dat (hid_t file_id, const char* file_name)
233 H5TBappend_records (file_id, "influenza_aa.dat", 1, dst_size,234 H5TBappend_records (file_id, "influenza_aa.dat", 1, dst_size,
234 dst_offset, dst_sizes, &p_data);235 dst_offset, dst_sizes, &p_data);
235 if (status < 0)236 if (status < 0)
236 check_h5_error (status, __FILE__, __LINE__); 237 check_h5_error (status, __FILE__, __LINE__);
237 }238 }
238239
239 /*240 /*
@@ -242,8 +243,10 @@ load_influenza_aa_dat (hid_t file_id, const char* file_name)
242 else243 else
243 {244 {
244 herr_t status = H5TBmake_table ("influenza_aa.dat", file_id,245 herr_t status = H5TBmake_table ("influenza_aa.dat", file_id,
245 "influenza_aa.dat", NFIELDS, 1, dst_size,246 "influenza_aa.dat", NFIELDS, 1,
246 field_names, dst_offset, field_type,247 dst_size,
248 field_names, dst_offset,
249 field_type,
247 chunk_size, fill_data, compress,250 chunk_size, fill_data, compress,
248 &p_data);251 &p_data);
249 if (status < 0)252 if (status < 0)

Valid XHTML 1.0 Strict

Copyright © 2009 Don Pellegrino All Rights Reserved.