| -rw-r--r-- | analysis/year.R | 20 | ||||
| -rw-r--r-- | src/Makefile.am | 39 | ||||
| -rw-r--r-- | src/aggregator.c | 6 | ||||
| -rw-r--r-- | src/assign/assign_protein_type.c (renamed from src/assign_protein_type.c) | 87 | ||||
| -rw-r--r-- | src/assign/assign_protein_type.h (renamed from src/assign_protein_type.h) | 0 | ||||
| -rw-r--r-- | src/error/check_error.c (renamed from src/check_error.c) | 0 | ||||
| -rw-r--r-- | src/error/check_error.h (renamed from src/check_error.h) | 0 | ||||
| -rw-r--r-- | src/error/check_h5_error.c (renamed from src/check_h5_error.c) | 0 | ||||
| -rw-r--r-- | src/error/check_h5_error.h (renamed from src/check_h5_error.h) | 0 | ||||
| -rw-r--r-- | src/error/check_ncbi_error.c (renamed from src/check_ncbi_error.c) | 0 | ||||
| -rw-r--r-- | src/error/check_ncbi_error.h (renamed from src/check_ncbi_error.h) | 0 | ||||
| -rw-r--r-- | src/load/load_influenza_aa_dat.c (renamed from src/load_influenza_aa_dat.c) | 4 | ||||
| -rw-r--r-- | src/load/load_influenza_aa_dat.h (renamed from src/load_influenza_aa_dat.h) | 0 | ||||
| -rw-r--r-- | src/load/load_influenza_faa.c (renamed from src/load_influenza_faa.c) | 10 | ||||
| -rw-r--r-- | src/load/load_influenza_faa.h (renamed from src/load_influenza_faa.h) | 0 | ||||
| -rw-r--r-- | src/model/gi_type_data.h | 21 | ||||
| -rw-r--r-- | src/model/gi_type_data_init.c | 36 | ||||
| -rw-r--r-- | src/model/gi_type_data_init.h | 14 | ||||
| -rw-r--r-- | src/model/sequence_data.h (renamed from src/sequence_data.h) | 5 | ||||
| -rw-r--r-- | src/model/sequence_data_init.c (renamed from src/sequence_data_init.c) | 6 | ||||
| -rw-r--r-- | src/model/sequence_data_init.h (renamed from src/sequence_data_init.h) | 0 | ||||
| -rw-r--r-- | src/updator.c | 4 |
22 files changed, 181 insertions, 71 deletions
diff --git a/src/aggregator.c b/src/aggregator.c index 07aba39..c00d912 100644 --- a/src/aggregator.c +++ b/src/aggregator.c | |||
| @@ -3,9 +3,9 @@ | |||
| 3 | * container. | 3 | * container. |
| 4 | */ | 4 | */ |
| 5 | 5 | ||
| 6 | #include "check_h5_error.h" | 6 | #include "error/check_h5_error.h" |
| 7 | #include "load_influenza_aa_dat.h" | 7 | #include "load/load_influenza_aa_dat.h" |
| 8 | #include "load_influenza_faa.h" | 8 | #include "load/load_influenza_faa.h" |
| 9 | 9 | ||
| 10 | #define FILE "influenza.h5" | 10 | #define FILE "influenza.h5" |
| 11 | 11 | ||
