12 files changed, 211 insertions, 13 deletions

diff --git a/src/aggregator.c b/src/aggregator.c
index 228e5c6..20da6df 100644
--- a/src/aggregator.c
+++ b/src/aggregator.c
@@ -3,6 +3,8 @@
  * container.
  */
 
+#include "assign_protein_type.h"
+#include "check_h5_error.h"
 #include "load_influenza_aa_dat.h"
 #include "load_influenza_faa.h"
 
@@ -14,22 +16,26 @@ main()
   /*
    * Create the HDF5 file.
    */
-  hid_t file_id = H5Fcreate (FILE, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+  //  hid_t file_id = H5Fcreate (FILE, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
 
   /*
    * Load the supplementary protein data file.
    */
-  load_influenza_aa_dat (file_id);
+  //  load_influenza_aa_dat (file_id);
 
   /*
    * Load the FASTA protein sequence data file.
    */
-  load_influenza_faa (file_id);
+  //  load_influenza_faa (file_id);
 
   /*
    * Close the HD5 file.
    */
-  H5Fclose (file_id);
+  //  herr_t status = H5Fclose (file_id);
+  //  if (status < 0)
+  //    check_h5_error (status, __FILE__, __LINE__);
+
+  assign_protein_type (0);
 
   return 0;
 }