Scratch for exploring the HDF5 file in R.

1 files changed, 11 insertions, 5 deletions

diff --git a/analysis/year.R b/analysis/year.R
index 85d3da1..b7da3c8 100644
--- a/analysis/year.R
+++ b/analysis/year.R
@@ -4,16 +4,22 @@ require(hdf5);
 
 hdf5load("/home/don/exp007/src/influenza.h5", tidy = TRUE);
 
-d <- influenza.aa.dat;
+A <- influenza.aa.dat;
+
+B <- influenza.faa;
 
 # All records for 1918.  Based on code from
 # http://wiki.r-project.org/rwiki/doku.php?id=tips:data-frames:select_observations
-p1918 <- d[d$Year == 1918, ]
+C <- A[A$Year == 1918, ]
 
 # Countries represented in the 1918 dataset.
-p1918$Country;
+C$Country;
 
 # All record with a year value.
-years <- d[d$Year != 0, ];
+D <- A[A$Year != 0, ];
+
+hist(D$Year);
+
+B[B$GI == 305182, ]
 
-hist(years$Year);
+B[B$"Protein Type" == "HA", ]