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-rw-r--r--src/Makefile.am2
-rw-r--r--src/controller/callbacks/reshape.c2
-rw-r--r--src/db/dbconnect.sqc12
-rw-r--r--src/model/data/base.sqc2
-rw-r--r--src/model/state/state.h3
-rw-r--r--src/util/check_error.c6
-rw-r--r--src/util/check_error_db.c13
-rw-r--r--src/util/check_error_db.h9
-rw-r--r--test/distance_sanity_check/gi_227977170_78032581.pngbin0 -> 51161 bytes
-rw-r--r--test/entropy/Align2Ref.m24
-rw-r--r--test/entropy/CalculateEntropy.m15
-rw-r--r--test/entropy/CalculateProteinEntropy.m25
-rw-r--r--test/entropy/FastNWalign2.c94
-rw-r--r--test/entropy/GenomeAlignments.m31
-rw-r--r--test/entropy/GenomePairwiseDist.m98
-rw-r--r--test/entropy/RefineAlignments.m276
-rw-r--r--test/entropy/don_anal.m40
-rw-r--r--test/entropy/nwalign_mod.m637
18 files changed, 1280 insertions, 9 deletions
diff --git a/test/distance_sanity_check/gi_227977170_78032581.png b/test/distance_sanity_check/gi_227977170_78032581.png
new file mode 100644
index 0000000..69c4c6e
--- a/dev/null
+++ b/test/distance_sanity_check/gi_227977170_78032581.png
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