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authorDon Pellegrino <don@drexel.edu>2009-06-13 21:48:26 (GMT)
committer Don Pellegrino <don@drexel.edu>2009-06-13 21:48:26 (GMT)
commit6412b187664f098ff20e3ed69dd3ee6da8f8a5e3 (patch) (unidiff)
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exp005-6412b187664f098ff20e3ed69dd3ee6da8f8a5e3.tar.gz
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Updated documentation.
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1Visualization system to explore the data from exp004.1Visualization system to explore the data from exp004.
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3======================3Light gray is used to display unselected points. White is used to
4CLUSTER.CIS.DREXEL.EDU4highlight the selection.
5======================
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7Building on cluster.cis.drexel.edu requires explicitly adding a number6Use
8of NCBI libraries and using the local install of the NCBI toolkit.
9Before running ./configure set the following:
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11 export LDFLAGS=-L/usr/local/ncbi/lib8 ESC: Clear selection.
12 export CPPFLAGS=-I/usr/local/ncbi/include9 Left-click, drag and release: Add box to selection.
10 Left-click: Add points under mouse pointer to selection.
1311
14Before running a program that makes use of BLAST create a ~/.ncbirc12=======
15file with the following contents. This instruction is based on a13PANCAKE
16message at14=======
17http://osdir.com/ml/science.biology.informatics.bulletin/2006-02/msg00061.html
1815
19 [NCBI]16 export LDFLAGS="-L/opt/ibm/db2/V9.5/lib32"
20 data=/usr/local/ncbi/data17 export CFLAGS="-I/opt/ibm/db2/V9.5/include"
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22 [BLAST]19======================
23 BLASTMAT=/usr/local/ncbi/data20CLUSTER.CIS.DREXEL.EDU
21======================
2422
23This project will not build on cluster as the OpenGL support libraries
24there do not include support for buffer objects.

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Copyright © 2009 Don Pellegrino All Rights Reserved.