author | Don Pellegrino <don@drexel.edu> | 2009-06-13 21:48:26 (GMT) |
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committer | Don Pellegrino <don@drexel.edu> | 2009-06-13 21:48:26 (GMT) |
commit | 6412b187664f098ff20e3ed69dd3ee6da8f8a5e3 (patch) (unidiff) | |
tree | 1a9b7b2a9cfb136c1bad88135918e61fa3b145c1 | |
parent | b2c22e061bfbacd558f196d9c53bdd7fa3a09d2c (diff) | |
download | exp005-6412b187664f098ff20e3ed69dd3ee6da8f8a5e3.zip exp005-6412b187664f098ff20e3ed69dd3ee6da8f8a5e3.tar.gz exp005-6412b187664f098ff20e3ed69dd3ee6da8f8a5e3.tar.bz2 |
Updated documentation.
-rw-r--r-- | README | 32 |
1 files changed, 16 insertions, 16 deletions
@@ -1,24 +1,24 @@ | |||
1 | Visualization system to explore the data from exp004. | 1 | Visualization system to explore the data from exp004. |
2 | 2 | ||
3 | ====================== | 3 | Light gray is used to display unselected points. White is used to |
4 | CLUSTER.CIS.DREXEL.EDU | 4 | highlight the selection. |
5 | ====================== | ||
6 | 5 | ||
7 | Building on cluster.cis.drexel.edu requires explicitly adding a number | 6 | Use |
8 | of NCBI libraries and using the local install of the NCBI toolkit. | ||
9 | Before running ./configure set the following: | ||
10 | 7 | ||
11 | export LDFLAGS=-L/usr/local/ncbi/lib | 8 | ESC: Clear selection. |
12 | export CPPFLAGS=-I/usr/local/ncbi/include | 9 | Left-click, drag and release: Add box to selection. |
10 | Left-click: Add points under mouse pointer to selection. | ||
13 | 11 | ||
14 | Before running a program that makes use of BLAST create a ~/.ncbirc | 12 | ======= |
15 | file with the following contents. This instruction is based on a | 13 | PANCAKE |
16 | message at | 14 | ======= |
17 | http://osdir.com/ml/science.biology.informatics.bulletin/2006-02/msg00061.html | ||
18 | 15 | ||
19 | [NCBI] | 16 | export LDFLAGS="-L/opt/ibm/db2/V9.5/lib32" |
20 | data=/usr/local/ncbi/data | 17 | export CFLAGS="-I/opt/ibm/db2/V9.5/include" |
21 | 18 | ||
22 | [BLAST] | 19 | ====================== |
23 | BLASTMAT=/usr/local/ncbi/data | 20 | CLUSTER.CIS.DREXEL.EDU |
21 | ====================== | ||
24 | 22 | ||
23 | This project will not build on cluster as the OpenGL support libraries | ||
24 | there do not include support for buffer objects. | ||